PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01767.1.p
Common NameEUGRSUZ_A01767, LOC104440195
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 243aa    MW: 27746.8 Da    PI: 6.2523
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01767.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.9e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+eEd +l+ +v ++G  +W+  +++ g+ R++k+c++rw +yl
  Eucgr.A01767.1.p 14 KGTWTPEEDRKLKAYVSKYGFWNWRQLPKYAGLSRCGKSCRLRWMNYL 61
                      799*******************************************97 PP

2Myb_DNA-binding49.78.3e-1667111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ T+eE++ +v++  +lG++ W++Ia+ ++ gRt++++k++w++ 
  Eucgr.A01767.1.p  67 RGNYTKEEEDTIVRLQGLLGNK-WSAIASQLP-GRTDNEVKNHWHTN 111
                       899*******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.713965IPR017930Myb domain
SuperFamilySSF466892.22E-3011108IPR009057Homeodomain-like
SMARTSM007174.9E-141363IPR001005SANT/Myb domain
PfamPF002494.5E-151461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-241568IPR009057Homeodomain-like
CDDcd001671.37E-101661No hitNo description
SMARTSM007175.4E-1566114IPR001005SANT/Myb domain
PROSITE profilePS5129419.37666116IPR017930Myb domain
PfamPF002494.3E-1467111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.3E-2469117IPR009057Homeodomain-like
CDDcd001679.30E-1069112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MARTPGRDKN GMKKGTWTPE EDRKLKAYVS KYGFWNWRQL PKYAGLSRCG KSCRLRWMNY  60
LRPDIKRGNY TKEEEDTIVR LQGLLGNKWS AIASQLPGRT DNEVKNHWHT NLKKRLNQNT  120
QPSSTTSPQE ATITENHSWD HEAIPNNISD TSPNNILDLP MDGPMTAQIV EGFASLHSSS  180
SSRETSLSLC METVDFSNTE YEASLDTYIA ESSGSFWTEP FITDNNIESW LLLDERSHDV  240
FY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-27121175109B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01767.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051469.10.0PREDICTED: myb-related protein Myb4-like
SwissprotQ7XBH44e-59MYB4_ORYSJ; Myb-related protein Myb4
TrEMBLA0A059DGA20.0A0A059DGA2_EUCGR; Uncharacterized protein
STRINGVIT_12s0134g00480.t013e-71(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.18e-58myb domain protein 15